Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825368.1_cds_XP_016502293.1_15948
CDS Infomation

[gene=LOC107820516] [db_xref=GeneID:107820516] [protein=protein JASON-like] [protein_id=XP_016502293.1] [location=complement(join(38800..38889,38977..40048,40142..40177,40271..40365,40846..40932))] [gbkey=CDS]
Sequence

ATGGGTTGTTTTCTTGGGTGTTTTGGTGGTGATAAGGACAAGAAACGTCGCAGCAAACAG
AGGCACAAAGTCATCCCTCGAGACCAAAAACATGTTTGTAGGGATCCTCCAAAAAGCACC
ATCTCCACTGAACAAAGCATCACAGAGGAACCCTCCTCTGAGAACTTTGTTGCGGAAGCA
CGAGATGATGGGTCTCGGAACTTGGTTGCAGAAGCACAAGATAGGTCTGAGGAACAACTG
AGCTTGAGTGCTAGAAAAAGAGTTACCTTTGATTCAAAGGTCACTACATATGATCCTGTT
TCAATCTATGAAAGTACAGATTCTTTACCTGAAAGCAAGAAAGCTGGTGAAAACGAAGAA
GAGGAGGGTTGTCTTGCTAAATCAAGCCAGTCCAACACTTCCTCAGAAGAGGGTTCGGCC
ATATCTAGTGTTGGATCATACCCTCCAAACCACAGGTATCAGAACTGTAGAGACAGTGAT
GATGAGGCTGAGGAGTTTGGTGACGACAGTGACTTGGACGACGAATGTGATCTCGATGAT
GAAGACTACAGCGGGGATTCCGATTGTGAAGGTGGAATTCAAGTGTGGTCTGAATCAGTG
GTAACTGCATCATTGGGATCTAAGGTTGATGACAAGTCCTTTCATCTAGTGAATGACGAG
GAGGAAGTGGATAGTCCTGCTATGTTTGGCGTGCCTGAGAAGGAAATGAGAAAGGGCGAA
ACAAAAGGATATGTAAGAGATAGGAGTGCTTATATCCATCCTGTGTTGAACCCTGTGGAA
AACCTCAGTCAGTGGAAATCTGTTAAATCAAAAGCAGCAGAACCCTTGAAGCTGCTGCCG
CAGAAGGAAAATTTTGCCGCAGAAGTAGAAGGCCCTCGTGCTTCATTCAGTTTAGAACCG
ACATTTAAGCAATCATCGTCATCTAGTTTCAGGCCAAAGCTTAAGGATCAAGAAACTGGA
GTTGATGCTAGTCTCTCAAATTGGTTGGTTACACCTGACACCACTAAGAAGGCTGGCTCC
GGTATGCTTGAGGCTGTTACATCAGAAAAGAGTATTTCACAGGGTTCCAACTCTGTGATG
AGCTTTGAAGACAGACCGATTTTAGGTGCCTTGACAGTTGAGGAGCTGAAACAGATGTCG
GCGTATTCCTCCCCGAGGAAATCACCCAGTCGGAGCCCTGATGAGATGCCTATCATAGGA
ACTGTTGGGACCTACTGGAATCCCTCTACGAACTCTGGGTCAGCTTCTTCTTTTAAAGGC
ATACCAAACTCAACTAGCAAGTACAGAGAGGATAAGAGAGTGAATTGGCATTCAACTCCA
TTTGAGACAAGACTGGACAGAGCCTTGAAACAAGGTTCTGCAGAAGCCTCTAAAGCTTGA

Peptide Sequence

PEP ID

XP_016502293.1
PEP Infomation

PREDICTED: protein JASON-like [Nicotiana tabacum]
Sequence

MGCFLGCFGGDKDKKRRSKQRHKVIPRDQKHVCRDPPKSTISTEQSITEEPSSENFVAEA
RDDGSRNLVAEAQDRSEEQLSLSARKRVTFDSKVTTYDPVSIYESTDSLPESKKAGENEE
EEGCLAKSSQSNTSSEEGSAISSVGSYPPNHRYQNCRDSDDEAEEFGDDSDLDDECDLDD
EDYSGDSDCEGGIQVWSESVVTASLGSKVDDKSFHLVNDEEEVDSPAMFGVPEKEMRKGE
TKGYVRDRSAYIHPVLNPVENLSQWKSVKSKAAEPLKLLPQKENFAAEVEGPRASFSLEP
TFKQSSSSSFRPKLKDQETGVDASLSNWLVTPDTTKKAGSGMLEAVTSEKSISQGSNSVM
SFEDRPILGALTVEELKQMSAYSSPRKSPSRSPDEMPIIGTVGTYWNPSTNSGSASSFKG
IPNSTSKYREDKRVNWHSTPFETRLDRALKQGSAEASKA

Transcript Sequence

Gene sequence data has not been registered.